=> Bootstrap dependency digest>=20010302: found digest-20160304
=> Checksum SHA1 OK for mpqc-2.3.1.tar.bz2
=> Checksum RMD160 OK for mpqc-2.3.1.tar.bz2
=> Checksum SHA512 OK for mpqc-2.3.1.tar.bz2
===> Installing dependencies for mpqc-2.3.1nb6
=> Tool dependency libtool-base>=2.4.2nb9: found libtool-base-2.4.6nb1
=> Tool dependency gmake>=3.81: found gmake-4.1nb4
=> Tool dependency nbpatch-[0-9]*: found nbpatch-20151107
=> Tool dependency f2c>=20090411nb2: found f2c-20100903nb1
=> Build dependency libtool-fortran>=2.4.2nb9: found libtool-fortran-2.4.6nb1
=> Build dependency libint>=2.0.0: found libint-2.0.0
=> Build dependency cwrappers>=20150314: found cwrappers-20180325
=> Full dependency perl>=5.0: found perl-5.26.2
=> Full dependency blas>=1.0nb3: found blas-3.7.1
=> Full dependency lapack>=3.1.1: found lapack-3.7.1
=> Full dependency libf2c>=20090201nb3: found libf2c-20090201nb3
===> Overriding tools for mpqc-2.3.1nb6
===> Extracting for mpqc-2.3.1nb6
===> Patching for mpqc-2.3.1nb6
=> Applying pkgsrc patches for mpqc-2.3.1nb6
===> Creating toolchain wrappers for mpqc-2.3.1nb6
===> Configuring for mpqc-2.3.1nb6
=> Modifying GNU configure scripts to avoid --recheck
=> Replacing config-guess with pkgsrc versions
=> Replacing config-sub with pkgsrc versions
=> Replacing install-sh with pkgsrc version
=> Replacing wish interpreter in src/bin/molrender/tkmolrender.in.
INFO: [replace-interpreter] Nothing changed in src/bin/molrender/tkmolrender.in.
=> Replacing Perl interpreter in src/bin/mpqc/ccarun.in src/bin/mpqc/mpqcrun.in.
checking build system type... x86_64-unknown-freebsd11
checking host system type... x86_64-unknown-freebsd11
checking target system type... x86_64-unknown-freebsd11
Using extra library directories: -L/usr/pkg/lib -Wl,-R/usr/pkg/lib
checking whether ln -s works... yes
checking for a BSD-compatible install... /usr/bin/install -c -o pbulk -g users
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checking for x86_64-unknown-freebsd11-gcc... clang
checking for C compiler default output file name... a.out
checking whether the C compiler works... yes
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checking whether we are using the GNU Fortran 77 compiler... no
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checking how to get verbose linking output from f77... -v
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checking "for C++ typename keyword"... "yes"
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configure: WARNING: iostream: present but cannot be compiled
configure: WARNING: iostream:     check for missing prerequisite headers?
configure: WARNING: iostream: see the Autoconf documentation
configure: WARNING: iostream:     section "Present But Cannot Be Compiled"
configure: WARNING: iostream: proceeding with the preprocessor's result
configure: WARNING: iostream: in the future, the compiler will take precedence
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configure: WARNING: sstream: present but cannot be compiled
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configure: WARNING: sstream: see the Autoconf documentation
configure: WARNING: sstream:     section "Present But Cannot Be Compiled"
configure: WARNING: sstream: proceeding with the preprocessor's result
configure: WARNING: sstream: in the future, the compiler will take precedence
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checking for a sed that does not truncate output... /var/pkgsrc/work/biology/mpqc/work/.tools/bin/sed
checking for ld used by clang... /usr/bin/ld
checking if the linker (/usr/bin/ld) is GNU ld... yes
checking for /usr/bin/ld option to reload object files... -r
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checking how to recognise dependent libraries... pass_all
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checking how to run the C++ preprocessor... clang++ -E
checking the maximum length of command line arguments... (cached) 262144
checking command to parse /usr/bin/nm output from clang object... ok
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checking for correct ltmain.sh version... yes
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checking for clang option to produce PIC... -fPIC
checking if clang PIC flag -fPIC works... yes
checking if clang static flag -static works... yes
checking if clang supports -c -o file.o... yes
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checking how to hardcode library paths into programs... immediate
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configure: creating libtool
appending configuration tag "CXX" to libtool
checking for ld used by clang++... /usr/bin/ld
checking if the linker (/usr/bin/ld) is GNU ld... yes
checking whether the clang++ linker (/usr/bin/ld) supports shared libraries... no
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checking if clang++ PIC flag -fPIC works... yes
checking if clang++ static flag -static works... yes
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checking whether the clang++ linker (/usr/bin/ld) supports shared libraries... no
checking dynamic linker characteristics... no
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appending configuration tag "F77" to libtool
checking if libtool supports shared libraries... no
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checking whether to build static libraries... yes
checking for f77 option to produce PIC... -fPIC
checking if f77 PIC flag -fPIC works... yes
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checking if f77 supports -c -o file.o... yes
checking whether the f77 linker (/usr/bin/ld) supports shared libraries... yes
checking dynamic linker characteristics... no
checking how to hardcode library paths into programs... immediate
Skipping ./Makefile
Skipping ./bin/Makefile
Skipping ./doc/Makefile
Skipping ./lib/Makefile
Skipping ./lib/basis/Makefile
Skipping ./lib/cca/Makefile
Skipping ./lib/elisp/Makefile
Skipping ./lib/perl/Makefile
Skipping ./src/bin/molrender/Makefile
Skipping ./src/bin/Makefile
Skipping ./src/bin/mpqc/Makefile
Skipping ./src/bin/mpqc/validate/Makefile
Skipping ./src/bin/scls/Makefile
Skipping ./src/bin/scpr/Makefile
Skipping ./src/lib/chemistry/cca/Makefile
Skipping ./src/lib/chemistry/qc/basis/Makefile
Skipping ./src/lib/chemistry/qc/Makefile
Skipping ./src/lib/chemistry/qc/cints/Makefile
Skipping ./src/lib/chemistry/qc/dft/Makefile
Skipping ./src/lib/chemistry/qc/intcca/Makefile
Skipping ./src/lib/chemistry/qc/intv3/Makefile
Skipping ./src/lib/chemistry/qc/mbpt/Makefile
Skipping ./src/lib/chemistry/qc/mbptr12/Makefile
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Skipping ./src/lib/chemistry/qc/psi/Makefile
Skipping ./src/lib/chemistry/qc/scf/Makefile
Skipping ./src/lib/chemistry/qc/wfn/Makefile
Skipping ./src/lib/chemistry/Makefile
Skipping ./src/lib/chemistry/molecule/Makefile
Skipping ./src/lib/chemistry/solvent/Makefile
Skipping ./src/lib/Makefile
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Skipping ./src/lib/math/optimize/Makefile
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Skipping ./src/lib/util/ref/Makefile
Skipping ./src/lib/util/render/Makefile
Skipping ./src/lib/util/state/Makefile
Skipping ./src/Makefile
configure: creating ./config.status
config.status: creating lib/LocalMakefile
config.status: creating lib/cca/components.cca
config.status: creating bin/sc-config
config.status: creating bin/mkf77sym.pl
config.status: creating src/bin/mpqc/mpqcrun
config.status: creating src/bin/mpqc/ccarun
config.status: creating src/bin/mpqc/validate/makeccain.pl
config.status: creating doc/doxygen.cfg
config.status: creating doc/doxygen.man1.cfg
config.status: creating doc/doxygen.man3.cfg
config.status: creating src/lib/scconfig.h
=> Modifying libtool scripts to use pkgsrc libtool
=> Modifying libtool scripts to use pkgsrc depcomp